Group Leader

Dr. Spyros Gkelis       
Associate Professor 



Spyros got his Bachelor’s degree in Biology, as well his PhD in Aristotle University of Thessaloniki. His PhD thesis was on characterization of cyanobacteria and their bioactive peptides. Part of his PhD was at the University of Helsinki, Finland (in Prof. Kaarina Sivonen’s lab).

Since 2009 he has been lecturer assistant professor, and associate professor at the School of Biology, Aristotle University of Thessaloniki. In addition to doing research (see research projects) he teaches  undergraduate/Master’s courses in Biodiversity, Phycology, Bioinformatics, Aquacultures. He is the deputy director of the MSc Program Ecological water quality and management at a river basin level and and serves in the board of the MSc Program Applied Bioinformatics. He is the Head of the Department of Botany (2022-2025).

Postdoctoral collaborators

Dr. Ariel Kamiński
Biologist, M.Sc., Ph.D.



Ariel is a biologist and got his Ph.D. at Jagiellonian University in Krakow, Poland. In the laboratory, he is primarily interested in the determining stability of the secondary metabolites of cyanobacteria, cyanotoxins phytoremediation, and the influence of xenobiotics on aquatic plants. At the AUTH, with Spyros Gkelis, Manthos Panou, and Dimitris Pappas, he works on the effects of various species of cyanobacteria on selected plants.

PhD students

Manthos Panou
BSc Biology, MSc Biotechnology and Microbiology



Manthos is a biologist with Master Degree on Biotechnology-Molecular and microbiological analysis of products and food” master program in AUTH. His MSc thesis was on the characterization of cyanobacteria strains such as Cylindrospermopsis raciborskii. He did his bachelor degree in Biology, in AUTH, Greece, whilst his bachelor thesis was on phytoplankton in Lake Karla, Greece.

In 2018 he started his PhD thesis, supervised by Spyros Gkelis, in the field of isolation and characterization of cyanobacteria from lesser-known envirnoments. Particularly, his research  is dealing with the characterisation of cyanobacteria strains and the bioprospecting of bioactive compounds contributing to the emergence of the diversity of cyanobacteria, from Greece, at taxonomic, genomic and metabolic levels.

Member of  CyanoLab since 2013

Postgraduate collaborators

Sofia Vergetzi

BSc Biology

Sofia is an Biologist working on Cyanolab. Her undergraduate thesis was on the application of CRISPR-Cas9 protocol on on Chlorella strains, to achieve enhancement of their beta-carotene production.

Member of Cyanolab since 2022

MSc Students

Sofoklis Keisaris

BSc Biology, MSc Student

Sofoclis is a biologist. On his bachelor thesis he investigated marine invertebrates. Currently, he is participating in the MSc of AUTh “Intergraded Management of River Basins and Coastal Areas” and he is thesis (co-supervised with Dr. Psomopoulos) is on Artificial intelligence and
Convolutional Neural Networks for taxa recognition and classification on cyanobacteria microscopy images.

Member since 2023

Georgia Florokapi

BSc Agriculture, MSc Student

Georgia is an MSc Agronomist and an accredited agricultural advisor. She studied at School of Agriculture at the University of Thessaly. On her bachelor thesis she investigated the impacts on growth and biochemical characteristics of oregano on increased soil cadmium levels combined with nitrogen. Currently, she is participating in the master degree of AUTh “Biotechnology- Molecular and microbiological analysis of products and food” and she is researching the potential use of cyanobacteria as biofertilizers.

Member since 2022

BSc Students

Michalis Michailidis
BSc Biology Student  



Michalis is an undergraduate student currently working on the detection of gene clusters of bioactive molecules in the genome of cave dwelling cyanobacteria.

Member of CyanoLab since 2021
John Plesias
BSc Biology Student    



John is an undergraduate student, currently working on the detection and phylogenetic analysis of the genes involved in cyanobacterial nitrogen fixation.  


Member of CyanoLab since 2021

Dimitris Trainos

BSc Biology Student

Dimitris is an undergraduate student, currently working on the characterization of photosynthetic microbes from thermal springs.

Member of CyanoLab since 2022

Nicolas Karakitsios-Giantsios

BSc Biology Student

Nicolas is a graduate of the Faculty of History and Archeology specializing in Archeology and History of Art (2019). Currently he is an undergraduate student in the School of Biology an he is working on the metagenomic investigation of photosynthetic microorganisms in archaeological sites.

Member of Cyanolab since 2022

Georgios Asprogiannis

BSc Biology Student

Georgios Asprogiannis is an undergraduate student in the School of Biology, currently working on a study concerning Greek elements in the nomenclature of Cyanobacteria.

Member of Cyanolab since 2023

Evi Foutsitzi

BSc Biology student

Evi is an undergraduate student in the School of Biology, currently working on the characterization of photosynthetic microorganisms from lichens, archaeological sites and lakes.

Member of Cyanolab since 2023

Stavroula Kampantai

Stavroula is an undergraduate student in the School of Biology, currently working on the characterization of photosynthetic microorganisms from lichens, archaeological sites and lakes.

Member of Cyanolab since 2023

Aris Zafeiropoulos-Parasos

Aris is an undergraduate student in the School of Biology, currently working on the characterization of photosynthetic microorganisms from lichens, archaeological sites and lakes.

Member of Cyanolab since 2023

Alumni

Postdoctoral collaborators
Dr. Panagiotis Giannogonas  

PhD students
Despoina Konstantinou
Dimitris Pappas
Urania Lortou

Visiting PhD students
Aga Brozowska (University of Poznan, Poland)

MSc Students
Georgia Papapanagiotou
Rania Lortou
Despoina Konstantinou 
Manthos Panou
Javier Díaz Álvarez
Ourania Tsoulanaki [co-supervision with assist. prof. E. Chanlidou]
Eleftherios Deligiannis [co-supervision with assist. prof. R. Karousou]
Yiolanda Vergou
Maria Kroustalaki
Christos Giannakopoulos
Themis Parisis
 
BSc Students
Nikos Pappas
Nikos Zaoutsos
Sofia Papadimitriou
Donita Kati
Okan Kalentzi [co-supervision with prof. Ch. Chintiroglou].
Amalia Theodoridou [co-supervision with prof. Ch. Chintiroglou]
Maria Mastoraki [co-supervision with prof. Ch. Chintiroglou]
Giorgos Vergis
Manthos Panou
Konstantina Siampouli
Marilou Natsi [co-supervision with assoc. prof. E.-N. Panteris]
Antonia Kasampali [co-supervision with prof. Μ. Arsenakis]
Dimitra-Lida Rammou [co-supervision with prof. Ch. Chintiroglou]
Stamatia Ioakeim [co-supervision with prof. Μ. Arsenakis]
Anastasia Arvaniti [co-supervision with prof. Μ. Arsenakis]
Giorgia-Maria Di Lorenzo [co-supervision with prof. Μ. Arsenakis]
Maro Karageorgou [co-supervision with assist. prof. E. Loukogeorgaki]
Lena Valatsou [co-supervision with assist. prof. E. Loukogeorgaki]
Christos Papadopoulos
Kassiani Panagiotou [co-supervision with prof. E. Voultsiadou]
Anastasia Galani [co-supervision with prof. E. Voultsiadou]
Konstantinos Chnoudas [co-supervision with Dr. D. Fewer, Univ. of Helsinki]
Dimtris Pappas [co-supervision with assoc. prof. E.-N. Panteris]
Iordanis Ourailidis
Panagiotis Apostolidis [co-supervision with prof. Μ. Arsenakis]
Vasia Kakakiou
Christina Skodra
Dimitrios Karapliafis [co-supervision with assoc. prof. P. Malea]
Eva Daskalaki [co-supervision with prof. E. Voultsiadou]
Themis Parisis
Sofia Kerestetzopoulou
Christos Giannakopoulos
Panagiota Foteinidou [co-supervision with assist. prof. R. Karousou]
Panagiotis Sarantidis
Maximos Papadopoulos
Sofia Vergetzi

Visiting Erasmus BSc students
Pablo Fernandez-Tussy
Thomas Pister